1. 程式人生 > >外顯子分析彈錯解決方案:Invalid command line: Cannot process the provided BAM/CRAM file(s) because they were not indexed.

外顯子分析彈錯解決方案:Invalid command line: Cannot process the provided BAM/CRAM file(s) because they were not indexed.

highlight exe line light logs mtools and cannot not in

出現這種問題說明bam/cram文件沒有進行index.

Samtool能解決這個問題,以bam文件為例,輸入以下命令行即可解決問題:

/path/to/your/samtools index file.bam

  

外顯子分析彈錯解決方案:Invalid command line: Cannot process the provided BAM/CRAM file(s) because they were not indexed.